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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007826.1_678_728_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

678 - 728

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAGCTCTG

5'SS Class:

major

3'SS Sequence:

TCTCCGCAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

GGGGTCTGATCC

Flanking Amino Acid:

MSQGAEFWGRSYRSLGLFWL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.3

58.7

45.7

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

50.9

0.02

1.2

52.8

36.1

Minor 5ss

31.2

-2.1

4.2

40.4

45.8

Minor BPS

44.1

-0.4

1.7

48.18

41.4

Associated Gene:

Gene:

TM6SF2

Ensembl Gene ID:

ENSAPLG00000000927

Chromosome:

PEDO01007826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026469

78 - 2361

2284