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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007826.1_808_922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

808 - 922

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGGGG

5'SS Class:

major

3'SS Sequence:

CTCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

GGCACCGTCACC

Flanking Amino Acid:

IVVFLLGNLIGKYSSDISPA

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

60.4

44.3

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

0.61

0.7

68.9

31.6

Minor 5ss

34.7

-1.7

3.5

46.4

Minor BPS

43.4

-0.5

2.4

52.39

44.6

Associated Gene:

Gene:

TM6SF2

Ensembl Gene ID:

ENSAPLG00000000927

Chromosome:

PEDO01007826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026469

78 - 2361

2284

ENSAPLT00000001039

54 - 3141

3088