Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007827.1_1205_1428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1205 - 1428

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GACCCTTTTACT

Flanking Amino Acid:

KAEALPLVPMIVFAKDAHYA

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

66.7

40.4

Major BPS

74.2

0.6

39.4

Major PPT

80.1

0.68

0.7

72.7

32.1

Minor 5ss

28.3

-2.5

2.7

37.1

Minor BPS

54.6

0.23

1.7

67.23

43.1

Associated Gene:

Gene:

UROD

Ensembl Gene ID:

ENSAPLG00000010210

Chromosome:

PEDO01007827.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010665

21 - 3965

3945