Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007827.1_2709_2790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2709 - 2790

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

GGGTTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAC

U12 Branch Point Sequence:

CACCTCGTCACA

Flanking Amino Acid:

CMRQAGRYLPEFRETRAAQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.4

35.3

Major BPS

62.4

0.31

1.2

65.3

41.6

Major PPT

73.5

0.53

40.8

Minor 5ss

26.7

-2.7

3.2

34.9

41.1

Minor BPS

41.3

-0.6

2.3

48.71

42.2

Associated Gene:

Gene:

UROD

Ensembl Gene ID:

ENSAPLG00000010210

Chromosome:

PEDO01007827.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010665

21 - 3965

3945