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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007842.1_1839_2222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1839 - 2222

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTCAT

5'SS Class:

major

3'SS Sequence:

TCTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CGGCACTCACTC

Flanking Amino Acid:

AVQALKTRPREISFMRSCSM

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

68.8

43.8

Major BPS

64.9

0.37

29.8

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

34.1

-1.8

3.2

40.9

45.4

Minor BPS

39.9

-0.7

1.8

41.63

38.7

Associated Gene:

Gene:

PLEKHA2

Ensembl Gene ID:

ENSAPLG00000014892

Chromosome:

PEDO01007842.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015541

329 - 2555

2227