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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007850.1_10416_11101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10416 - 11101

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTGTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAT

U12 Branch Point Sequence:

CCCTCTCTATTC

Flanking Amino Acid:

VKEEKRKKELNEILKSTVSS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

71.5

38.5

Major BPS

0.5

1.4

79.6

35.6

Major PPT

73.9

0.54

0.8

65.1

36.3

Minor 5ss

30.9

-2.2

3.1

39.4

Minor BPS

44.8

-0.4

1.9

49.69

41.9

Associated Gene:

Gene:

HAND2

Ensembl Gene ID:

ENSAPLG00000007863

Chromosome:

PEDO01007850.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008153

10317 - 11657

1341