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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007859.1_5974_6084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5974 - 6084

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCAAG

5'SS Class:

major

3'SS Sequence:

TCTCCCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAC

U12 Branch Point Sequence:

TTGCACCCACCC

Flanking Amino Acid:

PLSFQEPPPKPSRPRYKPPP

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

64.9

42.8

Major BPS

52.8

0.07

1.4

66.7

39.9

Major PPT

0.68

0.7

73.6

24.6

Minor 5ss

31.9

-2.1

3.1

38.2

Minor BPS

40.4

-0.7

2.1

54.17

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009501

Chromosome:

PEDO01007859.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009915

2877 - 8916

6040