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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007955.1_5159_5286_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5159 - 5286

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGGCCCTGACCC

Flanking Amino Acid:

ATRSQQQRVKVLEGELQTEA

Intron Amino Acid Position:

1307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

73.3

37.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

59.8

0.22

Minor 5ss

40.6

-1.1

2.7

45.4

Minor BPS

50.1

-0

1.8

61.79

Associated Gene:

Gene:

NUMA1

Ensembl Gene ID:

ENSAPLG00000017673

Chromosome:

PEDO01007955.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035382

21 - 7550

7530

ENSAPLT00000024228

21 - 7550

7530

ENSAPLT00000018844

21 - 7550

7530