Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007955.1_5972_6106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5972 - 6106

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCACG

5'SS Class:

major

3'SS Sequence:

CCCTGTCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAC

U12 Branch Point Sequence:

GGTGGCCAAACC

Flanking Amino Acid:

LDELQPLNSTRKVTRSQSEA

Intron Amino Acid Position:

1469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.2

66.3

45.2

Major BPS

52.2

0.06

1.4

64.2

Major PPT

67.3

0.39

0.9

62.1

33.4

Minor 5ss

45.2

-0.5

2.6

58.6

45.7

Minor BPS

40.8

-0.7

2.3

52.45

44.7

Associated Gene:

Gene:

NUMA1

Ensembl Gene ID:

ENSAPLG00000017673

Chromosome:

PEDO01007955.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035382

21 - 7550

7530

ENSAPLT00000024228

21 - 7550

7530

ENSAPLT00000018844

21 - 7550

7530