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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007977.1_144_1157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144 - 1157

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCG

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCGGAC

U12 Branch Point Sequence:

CCTCCCCGGACC

Flanking Amino Acid:

VPTEEAKMFAEIFQKVQKQK

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

59.6

44.8

Major BPS

42.7

-0.4

1.2

34.3

33.1

Major PPT

85.6

0.8

80.6

Minor 5ss

37.2

-1.5

3.2

47.9

47.8

Minor BPS

46.7

-0.2

1.9

56.98

41.6

Associated Gene:

Gene:

RAB25

Ensembl Gene ID:

ENSAPLG00000021312

Chromosome:

PEDO01007977.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022751

21 - 3362

3342