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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007992.1_2877_3543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2877 - 3543

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCCA

5'SS Class:

major

3'SS Sequence:

CATCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCTTGCTGACCC

Flanking Amino Acid:

LERDSIRGMQGAMFRCSARC

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

53.6

45.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

82.6

0.73

0.8

76.6

31.5

Minor 5ss

42.6

-0.8

3.1

57.9

46.3

Minor BPS

46.4

-0.3

2.2

58.45

46.5

Associated Gene:

Gene:

FAM136A

Ensembl Gene ID:

ENSAPLG00000029702

Chromosome:

PEDO01007992.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024563

2136 - 4250

2115