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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007992.1_3685_3788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3685 - 3788

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTGCCCCCATGC

Flanking Amino Acid:

IVTGELERFQDRLSRCTLHC

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.43

0.9

62.2

33.6

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

39.9

-0.7

2.2

52.9

44.2

Associated Gene:

Gene:

FAM136A

Ensembl Gene ID:

ENSAPLG00000029702

Chromosome:

PEDO01007992.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024563

2136 - 4250

2115