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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008010.1_3133_3365_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3133 - 3365

Intron Length:
233

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGTAAG

5'SS Class:
major

3'SS Sequence:
TTTTGCCTTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCCTAC

U12 Branch Point Sequence:
TTTTTCCTACTT

Flanking Amino Acid:
AFLRLRTVGATVEFTVGEKP

Intron Amino Acid Position:
146

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.3
74
38.4

Major BPS
58.9
0.22
1.3
58.4
40

Major PPT
87
0.83
0.8
80.7
31.5

Minor 5ss
31
-2.2
2.6
32.6
35

Minor BPS
59.8
0.38
1.9
83.92
37.4

Associated Gene:

Gene:
UNC119B

Ensembl Gene ID:

Chromosome:
PEDO01008010.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1747 - 4684
2938

1747 - 5553
3807