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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_1238_1311_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1238 - 1311

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GGGGGCTCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGATCCCTATGG

Flanking Amino Acid:

PSSSSSSSEEDAQATRIGAA

Intron Amino Acid Position:

894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

55.8

0.13

46.6

41.5

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

-0.5

2.2

53.92

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025510

Chromosome:

PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029146

584 - 5429

4846