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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_1819_1899_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1819 - 1899

Intron Length:
81

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCGGGG

5'SS Class:
major

3'SS Sequence:
CCCGTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACCCAG

U12 Branch Point Sequence:
TACCCAGCACCT

Flanking Amino Acid:
SGASACPGLQSSPVSQGTEE

Intron Amino Acid Position:
750

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.7
0.32
1.3
49.8
46.9

Major BPS
46.2
-0.2
1.6
58.4
40.3

Major PPT
68
0.4
0.8
61
29.2

Minor 5ss
33.1
-1.9
3.7
46.9
48.5

Minor BPS
37.2
-0.8
2.4
56.1
45.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

584 - 5429
4846