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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_2036_2342_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2036 - 2342

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCCCCGTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

CCCGCTGTGAGG

Flanking Amino Acid:

LGRGGDGPGGGAARQQSPEQ

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

-0.1

1.6

46.5

Major PPT

58.1

0.18

48.5

39.3

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

36.5

-1.2

2.2

32.51

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025510

Chromosome:

PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029146

584 - 5429

4846