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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_2642_2741_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2642 - 2741

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CGGTGGCGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGAGAA

U12 Branch Point Sequence:

CGGGGCTGAGCG

Flanking Amino Acid:

ELEDRMQQLQRCVERLKEVN

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

45.9

-0.2

1.2

38.4

41.7

Major PPT

52.9

0.07

1.1

42.1

43.2

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

38.1

-1

36.44

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025510

Chromosome:

PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029146

584 - 5429

4846