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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_3064_3148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3064 - 3148

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CAGGGCTCAGCT

Flanking Amino Acid:

QGERNRLQGKVRELQEALAR

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

59.7

0.22

1.1

53.5

41.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

40.6

-0.6

2.1

52.89

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025510

Chromosome:

PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029146

584 - 5429

4846