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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008040.1_3347_3419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3347 - 3419

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAA

U12 Branch Point Sequence:

CGCTGCCCGACT

Flanking Amino Acid:

PPAEWARAAKSLEELEQAAG

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

45.7

-0.2

1.2

50.2

36.7

Major PPT

67.4

0.39

0.9

57.5

38.6

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

41.3

-0.6

2.2

56.82

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025510

Chromosome:

PEDO01008040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029146

584 - 5429

4846