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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008060.1_1643_1748_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1643 - 1748

Intron Length:
106

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGGCC

5'SS Class:
major

3'SS Sequence:
CCCATCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
GTGTCCCCATCC

Flanking Amino Acid:
PFFCRDPLTHRWQGRYHWGI

Intron Amino Acid Position:
181

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.5
0.37
1.2
60.6
40.1

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
68
0.41
0.8
61.2
29

Minor 5ss
35
-1.7
3.7
51
45.8

Minor BPS
46.1
-0.3
2.1
60.47
44.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01008060.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 3148
3128

21 - 3148
3128