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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008060.1_2207_2294_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2207 - 2294

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

GTGGTGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

CCCTCGGTGACG

Flanking Amino Acid:

EESNEFTNAQGETVAVRVCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

59.7

46.7

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

57.2

0.16

1.1

50.9

43.9

Minor 5ss

27.7

-2.6

2.7

36.8

Minor BPS

40.8

-0.8

2.6

45.4

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026184

Chromosome:

PEDO01008060.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044137

21 - 3148

3128