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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008073.1_2263_2337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2263 - 2337

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

ATCCCAACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

ATATCCCAACCC

Flanking Amino Acid:

AALALRPGCQGYSTDVCVPI

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

62.5

0.28

0.9

52.1

36.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

46.2

-0.3

2.2

62.39

42.7

Associated Gene:

Gene:

LDHD

Ensembl Gene ID:

ENSAPLG00000022939

Chromosome:

PEDO01008073.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030613

111 - 2832

2722

ENSAPLT00000030317

111 - 3002

2892

ENSAPLT00000025815

111 - 2855

2745