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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008073.1_2613_2689_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2613 - 2689

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCG

5'SS Class:

major

3'SS Sequence:

CCCGTCCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

TCCCCGCTGATG

Flanking Amino Acid:

RVHDFAERLGRRALAAGGTC

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

65.8

40.2

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

55.6

0.13

31.7

Minor 5ss

26.2

-2.7

3.2

31.7

42.8

Minor BPS

40.4

-0.9

2.2

44.19

42.3

Associated Gene:

Gene:

LDHD

Ensembl Gene ID:

ENSAPLG00000022939

Chromosome:

PEDO01008073.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030317

111 - 3002

2892

ENSAPLT00000025815

111 - 2855

2745