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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008073.1_491_582_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

491 - 582

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGA

5'SS Class:

major

3'SS Sequence:

GTGCCCGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCCGAG

U12 Branch Point Sequence:

GCGAGCCGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

38.5

-0.7

1.5

29.6

35.9

Major PPT

58.5

0.19

1.1

50.1

43.8

Minor 5ss

29.9

-2.3

3.3

40.1

45.6

Minor BPS

34.3

-1.2

37.54

39.7

Associated Gene:

Gene:

LDHD

Ensembl Gene ID:

ENSAPLG00000022939

Chromosome:

PEDO01008073.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030613

111 - 2832

2722

ENSAPLT00000030317

111 - 3002

2892

ENSAPLT00000025815

111 - 2855

2745