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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008073.1_725_1083_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

725 - 1083

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACCGTGG

5'SS Class:

weak_major

3'SS Sequence:

TGCCCGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCGC

U12 Branch Point Sequence:

TTTGCCCTCTCG

Flanking Amino Acid:

LRGTGLWFPVDPGADASLCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

43.7

46.2

Major BPS

28.8

-1.3

4.1

60.7

37.6

Major PPT

66.9

0.38

0.9

57.2

38.6

Minor 5ss

41.1

-1

3.4

49.3

Minor BPS

36.4

-1.1

3.7

59.68

47.8

Associated Gene:

Gene:

LDHD

Ensembl Gene ID:

ENSAPLG00000022939

Chromosome:

PEDO01008073.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030317

111 - 3002

2892