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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_1603_1665_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1603 - 1665

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGCATCA

5'SS Class:

weak_major

3'SS Sequence:

GCGGGGGGGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

CAGACCCTACCC

Flanking Amino Acid:

EESPGPSGGCWTWGRRPGLA

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.3

48.9

41.2

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

36.3

-0.7

1.6

18.7

36.5

Minor 5ss

32.2

-2

4.2

44.8

45.1

Minor BPS

45.4

-0.3

52.92

44.2

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008014

1512 - 4795

3284