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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_2309_2402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2309 - 2402

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGCGTGCG

5'SS Class:

major

3'SS Sequence:

CTTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGATGTGACT

Flanking Amino Acid:

MHTVSHDGPVAGLAFDINEP

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

56.9

42.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.9

0.58

0.8

69.8

Minor 5ss

-2.8

3.1

23.5

37.1

Minor BPS

47.9

-0

2.3

75.5

41.8

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284