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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_3031_3158_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3031 - 3158

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGCGTGGG

5'SS Class:

weak_major

3'SS Sequence:

TGTGCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTCCCCCACGT

Flanking Amino Acid:

EWERSFREYVLCEANVTIAT

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

47.6

42.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

74.2

0.55

0.9

66.6

35.6

Minor 5ss

28.5

-2.5

3.3

40.2

45.9

Minor BPS

41.4

-0.5

2.2

63.5

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284