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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_3268_3451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3268 - 3451

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

ACTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

TTTGGCTGAGCT

Flanking Amino Acid:

SKINETMLRLGIFGFLAFGF

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

57.4

41.8

Major BPS

69.4

0.48

71.6

33.8

Major PPT

82.5

0.73

0.8

73.6

36.3

Minor 5ss

23.7

-3

3.2

21.5

37.3

Minor BPS

49.1

0.01

2.2

76.75

45.6

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284