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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_3545_3632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3545 - 3632

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

CCCTTTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

ACCACCATCACC

Flanking Amino Acid:

LIVGGYFLIQGVMTLFSIKS

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

61.3

42.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

75.9

0.58

0.9

70.5

33.7

Minor 5ss

31.2

-2.2

3.3

32.4

42.3

Minor BPS

45.8

-0.3

54.19

43.5

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284