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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_3757_3847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3757 - 3847

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGGG

5'SS Class:

major

3'SS Sequence:

CAATTTTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CAATTTTTACCA

Flanking Amino Acid:

LTVAILAVAQVDGDSVSGIC

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

60.6

44.2

Major BPS

76.3

0.65

67.3

39.3

Major PPT

73.2

0.52

66.5

43.5

Minor 5ss

28.7

-2.4

3.5

38.3

46.7

Minor BPS

53.7

0.11

1.6

60.29

40.1

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284