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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_4068_4147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4068 - 4147

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CCCTTCCGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCCTTCCGAACA

Flanking Amino Acid:

ADGTMRLGEPTSNETLSCVI

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.4

68.2

38.6

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

65.6

0.35

61.1

33.8

Minor 5ss

33.9

-1.8

3.4

43.2

37.6

Minor BPS

47.5

-0.1

1.8

55.96

43.3

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312

ENSAPLT00000008014

1512 - 4795

3284