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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008081.1_4321_4417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4321 - 4417

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

VTIFCTFFTLATFVADWRNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

55.8

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.1

0.99

0.6

87.9

29.5

Minor 5ss

32.9

-1.9

38.8

40.9

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

SMO

Ensembl Gene ID:

ENSAPLG00000007726

Chromosome:

PEDO01008081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008014

1512 - 4795

3284

ENSAPLT00000036102

512 - 4823

4312

ENSAPLT00000032705

512 - 4823

4312