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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008085.1_1646_1733_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1646 - 1733

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGGCA

5'SS Class:

major

3'SS Sequence:

CGTGGGCACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TGGCACTGAGCA

Flanking Amino Acid:

YARDLRGIVEGYLGKIIDAE

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

62.8

37.7

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

0.11

45.9

40.7

Minor 5ss

22.7

-3.1

3.4

29.2

43.6

Minor BPS

45.6

-0.3

1.8

56.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028430

Chromosome:

PEDO01008085.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033527

509 - 3766

3258