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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008088.1_1043_1152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1043 - 1152

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAGAA

U12 Branch Point Sequence:

GACCCCAGAAGG

Flanking Amino Acid:

VESKLSEQLKLAFFHVRGDD

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

38.1

Major BPS

-0.2

38.2

30.5

Major PPT

76.3

0.59

0.7

69.3

24.5

Minor 5ss

-0.9

49.2

Minor BPS

40.8

-0.8

1.9

41.12

42.3

Associated Gene:

Gene:

DDX54

Ensembl Gene ID:

ENSAPLG00000013191

Chromosome:

PEDO01008088.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034700

195 - 3809

3615

ENSAPLT00000013792

195 - 3809

3615