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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008088.1_2772_2857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2772 - 2857

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCGTATTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GCACCCGTATTC

Flanking Amino Acid:

TSQLGLHPLFSACFEDTELE

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

74.5

0.55

0.9

65.2

40.9

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

-0.5

2.1

49.17

41.1

Associated Gene:

Gene:

DDX54

Ensembl Gene ID:

ENSAPLG00000013191

Chromosome:

PEDO01008088.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034700

195 - 3809

3615

ENSAPLT00000013792

195 - 3809

3615