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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008099.1_25038_28230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25038 - 28230

Intron Length:

3193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TTTCATGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.5

41.3

Major BPS

100

1.24

0.5

100

Major PPT

83.4

0.75

0.9

80.8

36.5

Minor 5ss

41.7

-0.9

3.1

63.6

40.6

Minor BPS

46.6

-0.1

68.03

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008827

Chromosome:

PEDO01008099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009173

257 - 28350

28094