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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_11597_11700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11597 - 11700

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

TCCTGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCGCGCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

38.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

71.7

0.49

0.8

64.6

Minor 5ss

29.6

-2.3

3.6

38.6

41.9

Minor BPS

40.4

-0.7

43.89

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029718

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036668

11503 - 14760

3258