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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_13309_13389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13309 - 13389

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGGCAC

5'SS Class:

major

3'SS Sequence:

TCTCTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAC

U12 Branch Point Sequence:

CCCCTCCAAACT

Flanking Amino Acid:

FGPHYSQRQEGILTEKKEYL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

51.1

41.8

Major BPS

54.8

0.12

1.1

61.2

32.7

Major PPT

74.3

0.55

0.8

65.5

36.1

Minor 5ss

24.1

-3

3.2

23.7

37.5

Minor BPS

-0.3

56.84

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029718

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036668

11503 - 14760

3258