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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_23320_23966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23320 - 23966

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

TTCCCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAG

U12 Branch Point Sequence:

TCTTCCTTCTCT

Flanking Amino Acid:

PNPRTKLRNQIPYRLKEADN

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

50.5

0.01

1.6

63.4

44.3

Major PPT

78.3

0.64

0.7

72.8

25.3

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

47.5

-0.1

3.6

83.49

43.8

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044260

16028 - 34465

18438

ENSAPLT00000005420

20162 - 34465

14304