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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_24947_25215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24947 - 25215

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

GPQAYRGAGSSSFGSSRDSV

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

69.7

41.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.95

0.7

84.8

35.4

Minor 5ss

-1

2.8

54.5

42.6

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044260

16028 - 34465

18438

ENSAPLT00000005420

20162 - 34465

14304