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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_27626_27895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27626 - 27895

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAGAT

U12 Branch Point Sequence:

AGATCGGGCATT

Flanking Amino Acid:

DVCNWSESDELSPSDDPDSV

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

36.4

Major BPS

49.4

-0

1.2

46.7

38.9

Major PPT

80.1

0.68

0.8

73.8

31.3

Minor 5ss

31.2

-2.1

3.7

47.6

Minor BPS

-1.1

2.6

52.58

42.4

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044260

16028 - 34465

18438

ENSAPLT00000005420

20162 - 34465

14304