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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_28034_28660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28034 - 28660

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

GGGTCCCTGATG

Flanking Amino Acid:

VGETYHQRKEGVTHQQWYLF

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

75.4

0.57

69.3

41.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

49.2

-0.2

1.8

52.81

42.1

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044260

16028 - 34465

18438

ENSAPLT00000005420

20162 - 34465

14304