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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_28925_29001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28925 - 29001

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

CCTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCCAGCTGATC

Flanking Amino Acid:

RNLNAKYNLVIKNPIEASVL

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

69.8

34.9

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

85.8

0.81

0.7

80.7

24.6

Minor 5ss

-1.8

3.4

49.1

41.3

Minor BPS

-1

2.2

44.43

37.9

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005420

20162 - 34465

14304

ENSAPLT00000044260

16028 - 34465

18438