Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_2959_3048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2959 - 3048

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TCCCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

CGCCCCTTAACG

Flanking Amino Acid:

LQEIFFAALPRQTPPEAEEL

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

57.1

42.2

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

75.9

0.58

0.7

69.2

24.6

Minor 5ss

31.9

-2.1

2.9

41.7

37.6

Minor BPS

65.8

0.36

1.5

61.57

45.9

Associated Gene:

Gene:

TIMELESS

Ensembl Gene ID:

ENSAPLG00000017164

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045375

257 - 6162

5906

ENSAPLT00000042913

257 - 6162

5906