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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_29782_29901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29782 - 29901

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGACAGCG

5'SS Class:

major

3'SS Sequence:

CTGTGCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAG

U12 Branch Point Sequence:

AAGCCCTTAGCA

Flanking Amino Acid:

QKDFRVINLMVPKDQVIDTV

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.2

52.2

39.1

Major BPS

45.8

-0.2

1.8

59.7

46.7

Major PPT

71.7

0.49

0.9

65.4

36.1

Minor 5ss

-2.2

3.3

36.1

41.9

Minor BPS

59.5

0.29

1.6

65.01

40.8

Associated Gene:

Gene:

PAN2

Ensembl Gene ID:

ENSAPLG00000005195

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044260

16028 - 34465

18438

ENSAPLT00000005420

20162 - 34465

14304