Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_3885_3962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3885 - 3962

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

TCCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

CGTCCCTGCAGC

Flanking Amino Acid:

ELYWKYKEVEGQDVIAAILA

Intron Amino Acid Position:

755

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

74.2

0.55

0.7

68.7

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

43.6

-0.5

2.1

53.35

43.9

Associated Gene:

Gene:

TIMELESS

Ensembl Gene ID:

ENSAPLG00000017164

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045375

257 - 6162

5906

ENSAPLT00000042913

257 - 6162

5906