Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_4734_4837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4734 - 4837

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

CCCCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

CCTGTCTGAGCC

Flanking Amino Acid:

QGLVNLLHQEGLAGPLRWLE

Intron Amino Acid Position:

931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

69.2

0.43

0.8

60.1

35.4

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

46.5

-0.2

1.8

54.1

44.2

Associated Gene:

Gene:

TIMELESS

Ensembl Gene ID:

ENSAPLG00000017164

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042913

257 - 6162

5906

ENSAPLT00000045375

257 - 6162

5906