Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_57681_57820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57681 - 57820

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

ATCCCTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CATCCCTCAAAC

Flanking Amino Acid:

RQPIHWAAFLGHLEVLKLLV

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.8

38.3

Major BPS

72.7

0.56

30.1

Major PPT

0.32

35.4

Minor 5ss

44.3

-0.6

3.2

57.9

46.7

Minor BPS

54.4

0.12

1.7

63.2

41.5

Associated Gene:

Gene:

ANKRD52

Ensembl Gene ID:

ENSAPLG00000016095

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016884

52190 - 69525

17336