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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_62529_62956_F


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
62529 - 62956

Intron Length:
428

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGTACA

5'SS Class:
major

3'SS Sequence:
GCTTTGTCCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAC

U12 Branch Point Sequence:
GCTGCTTTGACG

Flanking Amino Acid:
TIPVSPLHLAAYNGHCEALK

Intron Amino Acid Position:
611

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
74
36.3

Major BPS
74.1
0.6
1
66.7
39.9

Major PPT
75.9
0.58
0.9
72.9
37.4

Minor 5ss
38.9
-1.2
2.7
53.8
42.8

Minor BPS
58.4
0.12
1.5
58.64
43.7

Associated Gene:

Gene:
ANKRD52

Ensembl Gene ID:

Chromosome:
PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52190 - 69525
17336